Affinity and specificity

 

  • A low nM inhibitor of a protein that was isolated from a naïve 16-mer library.  The protein was crystallised with the inhibitor  bound. Several different peptides overlapped the same site.
  • Peptides have been isolated to thrombin and HIV-1 gp41. Maturation has led to these having subnanomolar affinities. Both are less than 25 amino acids.



Stability

 

  • An inhibitor with low nM IC50 selected from a naive 18-mer library. This had high selectivity over other isoforms of the protein. Different activation pathways inhibited with different affinities.
  • Peptides have been isolated that inhibit NGF binding to its receptor. These have low nM IC50s in competition assays and prevent a phenotypic change in cells.



Biological activity

 

  • A natural GPCR ligand was subjected to maturation for stability. Peptides were isolated that maintained activity but had greater stability in plasma.
  • A natural antimicrobial peptide was matured for stability. Peptides were more stable and had greater activity.